Human SNP ID | rs1011397 |
---|---|
Human chromosome | chr2 |
Human SNP position | 143932550 |
Pig chromosome | chr15 |
Pig SNP position | 8590015 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 2q22.3 |
Chromosome id | chr2 |
Chromosome position | 143932550 |
Reported gene | GTDC1 |
Mapped gene | LOC105373653 - LOC101928386 |
Upstream gene id | 105373653 |
Downstream gene id | 101928386 |
SNP gene ids | |
Upstream gene distance | 156436 |
Downstream gene distance | 4517 |
SNP risk allele | rs1011397-G |
SNPs | rs1011397 |
Merged | 0 |
SNP id current | 1011397 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.197 |
P value | 0.000008 |
Pvalue mlog | 5.09691001300805 |
P value text | (Energy balance ) |
Or beta | 0.04 |
%95 Ci | [NR] kcal/d increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | energy intake |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003939 |
Study accession | GCST001762 |