Human SNP ID | rs10109414 |
---|---|
Human chromosome | chr8 |
Human SNP position | 23893638 |
Pig chromosome | chr14 |
Pig SNP position | 8867523 |
PubMed ID | 20383146 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20383146 |
Study | New loci associated with kidney function and chronic kidney disease. |
Disease/Trait | Chronic kidney disease |
Initial sample | Up to 67,093 European ancestry individuals |
Replication sample | Up to 22,982 European ancestry individuals |
Region | 8p21.2 |
Chromosome id | chr8 |
Chromosome position | 23893638 |
Reported gene | STC1 |
Mapped gene | STC1 - LOC105379328 |
Upstream gene id | 6781 |
Downstream gene id | 105379328 |
SNP gene ids | |
Upstream gene distance | 38831 |
Downstream gene distance | 196462 |
SNP risk allele | rs10109414-T |
SNPs | rs10109414 |
Merged | 0 |
SNP id current | 10109414 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.42 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | (eGFRcrea) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | chronic kidney disease, serum creatinine measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003884, http://www.ebi.ac.uk/efo/EFO_0004518 |
Study accession | GCST000649 |