Human SNP ID | rs10061804 |
---|---|
Human chromosome | chr5 |
Human SNP position | 32748531 |
Pig chromosome | chr16 |
Pig SNP position | 19663597 |
PubMed ID | 22116950 |
---|---|
Journal | Hum Reprod |
Link | www.ncbi.nlm.nih.gov/pubmed/22116950 |
Study | Genetic variants and environmental factors associated with hormonal markers of ovarian reserve in Caucasian and African American women. |
Disease/Trait | Ovarian reserve |
Initial sample | 232 European ancestry female individuals, 200 African American female individuals |
Replication sample | NA |
Region | 5p13.3 |
Chromosome id | chr5 |
Chromosome position | 32748531 |
Reported gene | NPR3 |
Mapped gene | NPR3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 4883 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10061804-? |
SNPs | rs10061804 |
Merged | 0 |
SNP id current | 10061804 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (FSH levels - EA) |
Or beta | |
%95 Ci | |
Platform | Affymetrix [677261] |
CNV | N |
Mapped trait | ovarian reserve |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004770 |
Study accession | GCST001330 |