Human SNP ID | rs10045413 |
---|---|
Human chromosome | chr5 |
Human SNP position | 135565466 |
Pig chromosome | chr2 |
Pig SNP position | 143458570 |
PubMed ID | 21685187 |
---|---|
Journal | Thorax |
Link | www.ncbi.nlm.nih.gov/pubmed/21685187 |
Study | Genome-wide association study of smoking behaviours in patients with COPD. |
Disease/Trait | Age at smoking initiation in chronic obstructive pulmonary disease |
Initial sample | 3,397 European ancestry cases |
Replication sample | NA |
Region | 5q31.1 |
Chromosome id | chr5 |
Chromosome position | 135565466 |
Reported gene | CXCL14 |
Mapped gene | NEUROG1 - CXCL14 |
Upstream gene id | 4762 |
Downstream gene id | 9547 |
SNP gene ids | |
Upstream gene distance | 29517 |
Downstream gene distance | 5213 |
SNP risk allele | rs10045413-T |
SNPs | rs10045413 |
Merged | 0 |
SNP id current | 10045413 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.68 |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 0.039 |
%95 Ci | unit increase |
Platform | Illumina [~ 6300000] (imputed) |
CNV | N |
Mapped trait | chronic obstructive pulmonary disease, smoking initiation |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000341, http://www.ebi.ac.uk/efo/EFO_0005670 |
Study accession | GCST001113 |