SNP Detail For rs10042348
1.Mapping Information
Human SNP ID rs10042348
Human chromosome chr5
Human SNP position 51922017
Pig chromosome chr16
Pig SNP position 33184016
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region5q11.2
Chromosome idchr5
Chromosome position51922017
Reported geneNR
Mapped geneLOC105379196 - LOC105378959
Upstream gene id105379196
Downstream gene id105378959
SNP gene ids
Upstream gene distance476893
Downstream gene distance15674
SNP risk allelers10042348-?
SNPsrs10042348
Merged0
SNP id current10042348
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta1.2948
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821