Human SNP ID | rs1003719 |
---|---|
Human chromosome | chr21 |
Human SNP position | 37118795 |
Pig chromosome | chr13 |
Pig SNP position | 210827048 |
PubMed ID | 20463881 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20463881 |
Study | Digital quantification of human eye color highlights genetic association of three new loci. |
Disease/Trait | Eye color traits |
Initial sample | 5,951 European ancestry individuals |
Replication sample | 3,543 European ancestry individuals |
Region | 21q22.13 |
Chromosome id | chr21 |
Chromosome position | 37118795 |
Reported gene | TTC3, DSCR9 |
Mapped gene | TTC3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7267 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs1003719-A |
SNPs | rs1003719 |
Merged | 0 |
SNP id current | 1003719 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000000002 |
Pvalue mlog | 9.69897000433601 |
P value text | (CHS1) |
Or beta | 0.1 |
%95 Ci | [NR] % decrease |
Platform | Illumina [2543887] (imputed) |
CNV | N |
Mapped trait | eye color |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003949 |
Study accession | GCST000685 |