SNP Detail For rs10032931
1.Mapping Information
Human SNP ID rs10032931
Human chromosome chr4
Human SNP position 95537282
Pig chromosome chr8
Pig SNP position 133419855
2.Annotation Information
PubMed ID20395239
JournalHum Mol Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20395239
StudyGenome-wide association identifies ATOH7 as a major gene determining human optic disc size.
Disease/TraitOptic nerve measurement (cup-to-disc ratio)
Initial sample1,368 European ancestry twins from 666 families
Replication sample848 European ancestry twins from 531 families
Region4q22.3
Chromosome idchr4
Chromosome position95537282
Reported geneUNC5C
Mapped geneUNC5C
Upstream gene id
Downstream gene id
SNP gene ids8633
Upstream gene distance
Downstream gene distance
SNP risk allelers10032931-C
SNPsrs10032931
Merged0
SNP id current10032931
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000004
Pvalue mlog5.39794000867203
P value text
Or beta0.195
%95 Ci[0.10-0.29] unit decrease
PlatformIllumina [~ 2740000] (imputed)
CNVN
Mapped traitoptic disc size measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004832
Study accessionGCST000655