Human SNP ID | rs10032549 |
---|---|
Human chromosome | chr4 |
Human SNP position | 76476862 |
Pig chromosome | chr8 |
Pig SNP position | 76339922 |
PubMed ID | 23535967 |
---|---|
Journal | J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23535967 |
Study | Using multiple measures for quantitative trait association analyses: application to estimated glomerular filtration rate. |
Disease/Trait | Glomerular filtration rate |
Initial sample | 9,049 European ancestry individuals |
Replication sample | |
Region | 4q21.1 |
Chromosome id | chr4 |
Chromosome position | 76476862 |
Reported gene | SHROOM3 |
Mapped gene | SHROOM3 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 57619 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs10032549-A |
SNPs | rs10032549 |
Merged | 0 |
SNP id current | 10032549 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.47 |
P value | 0.00000001 |
Pvalue mlog | 8 |
P value text | (3-measure model) |
Or beta | 0.93 |
%95 Ci | [0.62-1.24] unit increase |
Platform | Affymetrix [> 2500000] (imputed) |
CNV | N |
Mapped trait | glomerular filtration rate |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005208 |
Study accession | GCST001923 |