SNP Detail For rs1002442
1.Mapping Information
Human SNP ID rs1002442
Human chromosome chr10
Human SNP position 60043304
Pig chromosome chr14
Pig SNP position 68405186
2.Annotation Information
PubMed ID24529757
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/24529757
StudyGenome-wide association study combining pathway analysis for typical sporadic amyotrophic lateral sclerosis in Chinese Han populations.
Disease/TraitAmyotrophic lateral sclerosis (sporadic)
Initial sample250 Han Chinese ancestry cases, 250 Han Chinese ancestry controls
Replication sampleNA
Region10q21.2
Chromosome idchr10
Chromosome position60043304
Reported geneANK3
Mapped geneANK3
Upstream gene id
Downstream gene id
SNP gene ids288
Upstream gene distance
Downstream gene distance
SNP risk allelers1002442-?
SNPsrs1002442
Merged0
SNP id current1002442
Contextnon_coding_transcript_exon_variant
Intergenic0
Allele frequency
P value0.0000003
Pvalue mlog6.52287874528033
P value text
Or beta
%95 Ci
PlatformIllumina [859311]
CNVN
Mapped traitsporadic amyotrophic lateral sclerosis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0001357
Study accessionGCST002337