SNP Detail For rs1002353
1.Mapping Information
Human SNP ID rs1002353
Human chromosome chr2
Human SNP position 217530422
Pig chromosome chr15
Pig SNP position 132694820
2.Annotation Information
PubMed ID25387708
JournalPsychophysiology
Linkwww.ncbi.nlm.nih.gov/pubmed/25387708
StudyHeritability and molecular genetic basis of acoustic startle eye blink and affectively modulated startle response: A genome-wide association study.
Disease/TraitAcoustic startle blink response
Initial sample3,323 European ancestry twins and their parents
Replication sampleNA
Region2q35
Chromosome idchr2
Chromosome position217530422
Reported geneDIRC3
Mapped geneDIRC3
Upstream gene id
Downstream gene id
SNP gene ids729582
Upstream gene distance
Downstream gene distance
SNP risk allelers1002353-?
SNPsrs1002353
Merged0
SNP id current1002353
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000006
Pvalue mlog6.22184874961635
P value text(Pleasant Difference Startle Scores)
Or beta0.093
%95 Ci[0.056-0.13] unit increase
PlatformIllumina [527829]
CNVN
Mapped traitacoustic startle blink response measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006875
Study accessionGCST002708