SNP Detail For rs10019835
1.Mapping Information
Human SNP ID rs10019835
Human chromosome chr4
Human SNP position 155712034
Pig chromosome chr8
Pig SNP position 46507064
2.Annotation Information
PubMed ID26305897
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26305897
StudyGenome-Wide Association and Trans-ethnic Meta-Analysis for Advanced Diabetic Kidney Disease: Family Investigation of Nephropathy and Diabetes (FIND).
Disease/TraitDiabetic kidney disease
Initial sample1,564 African American cases, 369 African American diabetic controls, 1,288 African American non-diabetic controls, 538 American Indian ancestry cases, 319 American Indian ancestry diabetic controls, 342 European ancestry cases, 404 European ancestry dia
Replication sample950 African American cases, 50 African American diabetic controls, 1,887 African American non-diabetic controls, 471 American Indian ancestry cases, 340 American Indian ancestry diabetic controls, 486 American Indian ancestry non-diabetic controls, 582 Eu
Region4q32.1
Chromosome idchr4
Chromosome position155712034
Reported geneGUCY1A3
Mapped geneGUCY1A3
Upstream gene id
Downstream gene id
SNP gene ids2982
Upstream gene distance
Downstream gene distance
SNP risk allelers10019835-?
SNPsrs10019835
Merged
SNP id current10019835
Contextintron_variant
Intergenic0
Allele frequency0.63
P value0.0000005
Pvalue mlog6.30102999566398
P value text(American Indian, additive )
Or beta1.4285715
%95 Ci
PlatformAffymetrix [NR]
CNVN
Mapped traitdiabetic nephropathy
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000401
Study accessionGCST003098