SNP Detail For rs1001021
1.Mapping Information
Human SNP ID rs1001021
Human chromosome chr22
Human SNP position 26007633
Pig chromosome chr14
Pig SNP position 46495022
2.Annotation Information
PubMed ID20713499
JournalAm J Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/20713499
StudyCross-disorder genomewide analysis of schizophrenia, bipolar disorder, and depression.
Disease/TraitSchizophrenia, bipolar disorder and depression (combined)
Initial sample402 European ancestry schizophrenia cases, 1,021 European ancestry bipolar I cases, 493 European ancestry bipolar II cases, 1,210 European ancestry MDD cases, 1,060 European ancestry controls
Replication sampleNA
Region22q12.1
Chromosome idchr22
Chromosome position26007633
Reported geneMYO18B
Mapped geneMYO18B
Upstream gene id
Downstream gene id
SNP gene ids84700
Upstream gene distance
Downstream gene distance
SNP risk allelers1001021-A
SNPsrs1001021
Merged0
SNP id current1001021
Contextintron_variant
Intergenic0
Allele frequency0.02
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformAffymetrix, Perlegen [1574154] (imputed)
CNVN
Mapped traitunipolar depression, mental or behavioural disorder, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761, http://www.ebi.ac.uk/efo/EFO_0000677, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST000774